Morphological Traits and Nuclear Genetic Diversity of Coptis sp. in Hoang Lien National Park, Lao Cai Province, Vietnam

Abstract

Coptis is a medicinal plant genus in the Ranunculaceae family, and is also known as “Hoang Lien” in Vietnamese. It is a perennial herb that grows in some regions of the world. However, Coptis is endangered and faces global threats. This study aimed to characterize some main morphological characteristics and performed a phylogenetic analysis of 11 samples of Coptis sp. collected from Hoang Lien National Park using nuclear DNA sequence analyses. All sample species have unique morphological traits with distinct yellow rhizomes and basal leaves with five segments. The petiole measures 13-25 cm and is smooth, while the leaf blade is ovate, ranging from 7 to 15.5 cm in length and 5.5 to 14 cm in width. The leaves are subleathery, glabrous on the underside, and sparsely puberulous on the veins on the upper side. The molecular characterization of Coptis sp. genotypes was determined by ITS markers. The length of the ITS1-ITS2 sequences varied from 363 to 371 nucleotides. The average nucleotide composition was 17.11% A, 31.25% C, 32.247% G and 19.41% T, respectively. The comparison with the GenBank database showed that the samples had 95.71- 96.37% similarity with the species Coptis quinquesecta. The genetic distance among the 11 Coptis samples fluctuated from 0.00 to 0.017. A neighbor-joining tree was constructed to show the genetic relationships among Coptis samples. The results indicated that this endangered species had low levels of genetic diversity. The study has provided valuable information for genetic-based conservation of this rare endemic species and suggested some conservation strategies.