Abstract

Marine biogenic habitats—habitats created by living organisms—provide essential ecosystem functions and services, such as physical structuring, nutrient cycling, biodiversity support, and increases in primary, secondary, and tertiary production. With the growing trend toward ecosystem approaches to marine conservation and fisheries management, there is greater emphasis on rigorously designed habitat monitoring programs. However, such programs are challenging to design for data‐limited habitats for which underlying ecosystem processes are poorly understood. To provide guidance in this area, we reviewed approaches to benthic assessments across well‐studied marine biogenic habitats and identified common themes related to indicator selection, sampling methods, and survey design. Biogenic habitat monitoring efforts largely focus on the characteristics, distribution, and ecological function of foundation species, but may target other habitat‐forming organisms, especially when community shifts are observed or expected, as well as proxies of habitat status, such as indicator species. Broad‐scale methods cover large spatial areas and are typically used to examine the spatial configuration of habitats, whereas fine‐scale methods tend to be laborious and thus restricted to small survey areas, but provide high‐resolution data. Recent, emerging methods enhance the capabilities of surveying large areas at high spatial resolution and improve data processing efficiency, bridging the gap between broad‐ and fine‐scale methods. Although sampling design selection may be limited by habitat characteristics and available resources, it is critically important to ensure appropriate matching of ecological, observational, and analytical scales. Drawing on these common themes, we propose a structured, iterative approach to designing monitoring programs for marine biogenic habitats that allows for rigorous data collection to inform management strategies, even when data and resource limitations are present. A practical application of this approach is illustrated using glass sponge reefs—a recently discovered and data‐limited habitat type—as a case study.

Highlights

  • Marine biogenic habitats, such as coral reefs, sea grass beds, and kelp forests, are created by living organisms that form emergent three‐dimensional structures creating niche space for other species (Bruno & Bertness, 2001; Dayton, 1972; Roberts, Johnston, & Poore, 2008) and providing important ecological functions

  • In areas dominated by soft, unstable substrates, biogenic structures create stable settlement habitats and facilitate larval recruitment and survival (Lindsey, Altieri, & Witman, 2006)

  • In addition to the wide range of ecosystem functions biogenic habitats contribute to, they provide a wide range of services

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Summary

Introduction

Marine biogenic habitats, such as coral reefs, sea grass beds, and kelp forests, are created by living organisms (foundation species) that form emergent three‐dimensional structures creating niche space for other species (Bruno & Bertness, 2001; Dayton, 1972; Roberts, Johnston, & Poore, 2008) and providing important ecological functions. In areas dominated by soft, unstable substrates, biogenic structures create stable settlement habitats and facilitate larval recruitment and survival (Lindsey, Altieri, & Witman, 2006). In addition to the wide range of ecosystem functions biogenic habitats contribute to, they provide a wide range of services. Biogenic structures defend against erosion and waves, reducing human death toll and infrastructure damage from natural disasters (Danielsen et al, 2005; Das & Vincent, 2009). Understanding the ecology and functioning of biogenic habitats has shed light on their vital importance for the continued conservation of natural resources and associated ecosystem services

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