Abstract

The reconstruction quality of a functional MRI sequence is determined by reconstruction algorithms as well as the information obtained from measurements. In this paper, we propose a Linear Dynamic Sparse Modelling method which is composed of measurement design and reconstruction processes to improve the image quality from both aspects. This method models an fMRI sequence as a linear dynamic sparse model which is based on a key assumption that variations of functional MR images are sparse over time in the wavelet domain. The Hierarchical Bayesian Kalman filter which follows the model is employed to implement the reconstruction process. To accomplish the measurement design process, we propose an Informative Measurement Design (IMD) method. The IMD method addresses the measurement design problem of selecting k feasible measurements such that the mutual information between the unknown image and measurements is maximised, where k is a given budget and the mutual information is extracted from the linear dynamic sparse model. The experimental results demonstrated that our proposed method succeeded in boosting the quality of functional MR images.

Highlights

  • Functional MR imaging technique has been widely used for measuring brain activity

  • We propose a Linear Dynamic Sparse Modelling method which is composed of measurement design and reconstruction processes to improve the image quality from both aspects

  • This method models an Functional MR imaging (fMRI) sequence as a linear dynamic sparse model which is based on a key assumption that variations of functional MR images are sparse over time in the wavelet domain

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Summary

Introduction

Functional MR imaging (fMRI) technique has been widely used for measuring brain activity. The most recent and advanced way [7,8,9] is to employ dynamic tracking techniques to causally and sequentially reconstruct the images in an fMRI sequence, and real-time reconstruction is realised. It greatly utilises the correlations of sparse patterns between two time-adjacent MR images so as to improve the reconstructed image quality

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