Abstract

AbstractThis presentation describes Java support for the SED-ML simulation experiment description language. Firstly, a Java API library for low-level manipulations of the SED-ML object model, and secondly a SED-ML editor, SED-ED, for visualizing and editing SED-ML workflows

Highlights

  • “Pioneering research and infrastructure development to model the dynamic aspects of biology”

  • Two independent implementations from VCell and SBSI teams merged in Spring 2010

  • //Validates the SEDML document and returns errors SedmlError validate ( String sedMLDoc)

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Summary

Introduction

JlibSEDML – a Java library for SED-ML and SED-ED – a graphical editing tool for SED-ML JlibSEDML update SED-ML application support in SBSI and SED-ED API to read/write and interpret SED-ML files. Two independent implementations from VCell and SBSI teams merged in Spring 2010.

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