Abstract

T-cadherin is unique among the family of type I cadherins, because it lacks transmembrane and cytosolic domains, and attaches to the membrane via a glycophosphoinositol anchor. The N-terminal cadherin repeat of T-cadherin (Tcad1) is approximately 30% identical to E-, N-, and other classical cadherins. However, it lacks many amino acids crucial for their adhesive function of classical cadherins. Among others, Trp-2, which is the key residue forming the canonical strand-exchange dimer, is replaced by an isoleucine. Here, we report the NMR structure of the first cadherin repeat of T-cadherin (Tcad1). Tcad1, as other cadherin domains, adopts a beta-barrel structure with a Greek key folding topology. However, Tcad1 is monomeric in the absence and presence of calcium. Accordingly, lle-2 binds into a hydrophobic pocket on the same protomer and participates in an N-terminal beta-sheet. Specific amino acid replacements compared to classical cadherins reduce the size of the binding pocket for residue 2 and alter the backbone conformation and flexibility around residues 5 and 15 as well as many electrostatic interactions. These modifications apparently stabilize the monomeric form and make it less susceptible to a conformational switch upon calcium binding. The absence of a tendency for homoassociation observed by NMR is consistent with electron microscopy and solid-phase binding data of the full T-cadherin ectodomain (Tcad1-5). The apparent low adhesiveness of T-cadherin suggests that it is likely to be involved in reversible and dynamic cellular adhesion-deadhesion processes, which are consistent with its role in cell growth and migration.

Highlights

  • T-cadherin, known as truncated, H, or heart cadherin is an unusual member of the family of type I cadherins that function in calcium-dependent homophilic cell-cell adhesion and thereby govern processes important for tissue morphogenesis such as cell recognition, sorting, coordinated cell movements, and polarity [1]

  • Human embryonal kidney (HEK) 293-EBNA cells (Invitrogen) were cultured in Dulbecco’s modified Eagle’s medium (DMEM) F12 supplemented with 10% fetal bovine serum, 1% glutamine and 10 mg/ml penicillin/streptomycin

  • Trp-2 from one monomer binds thereby into a hydrophobic pocket presented by the equivalent domain of a cadherin molecule on a neighboring cell

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Summary

EXPERIMENTAL PROCEDURES

DNA Constructs for NMR Studies—The DNA fragment encoding for the first two extracellular domains of T-cadherin (1–223, Tcad12) preceded by a His tag/Factor Xa cleavage site (MGH10SSGHID4KHMIEGR) was obtained by PCR using a cDNA of human T-cadherin. Bound proteins were removed by washing the column with. Refolding of the protein on the column was achieved by washing with the same buffer without urea. NMR Sample Preparation—Tcad and Tcad were dialyzed into 5 mM Tris, 10 mM NaCl, 1 mM EDTA, 1 mM TCEP, 0.02%. Stereospecific assignments and dihedral angle information were derived from 3D-HACAHB-COSY, 3D-HNHA, 3D-HNHB, 13CO-{13C␥}-SED- and 15N-{13C␥}-. Distance restraints were obtained from 15N- and 13C-edited NOESY spectra. Information about the backbone dynamics was derived from 15N-relaxation experiments including the measurement of T1, T2, and {1H}-15N NOE. Distance restraints were generated in NMRView and classified according to NOE-cross-peak intensities. Backbone dihedral angle restraints for ␾ and ␺ were derived based on 3JHNH␣, the determined 13C and 1H␣ chemical shifts, and on initial structure calculations.

Based on
RESULTS
Residues in disallowed regions
DISCUSSION
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