Abstract

The inhibition of triosephosphate isomerase (TPI) in glycolysis by the pyruvate kinase (PK) substrate phosphoenolpyruvate (PEP) results in a newly discovered feedback loop that counters oxidative stress in cancer and actively respiring cells. The mechanism underlying this inhibition is illuminated by the co-crystal structure of TPI with bound PEP at 1.6 Å resolution, and by mutational studies guided by the crystallographic results. PEP is bound to the catalytic pocket of TPI and occludes substrate, which accounts for the observation that PEP competitively inhibits the interconversion of glyceraldehyde-3-phosphate and dihydroxyacetone phosphate. Replacing an isoleucine residue located in the catalytic pocket of TPI with valine or threonine altered binding of substrates and PEP, reducing TPI activity in vitro and in vivo. Confirming a TPI-mediated activation of the pentose phosphate pathway (PPP), transgenic yeast cells expressing these TPI mutations accumulate greater levels of PPP intermediates and have altered stress resistance, mimicking the activation of the PK–TPI feedback loop. These results support a model in which glycolytic regulation requires direct catalytic inhibition of TPI by the pyruvate kinase substrate PEP, mediating a protective metabolic self-reconfiguration of central metabolism under conditions of oxidative stress.

Highlights

  • With the challenge of surviving in a constantly changing environment, cells have evolved mechanisms to flexibly regulate metabolism [1,2]

  • Active site residues engage PEP and make similar interactions to those observed for the triosephosphate isomerase (TPI) substrate dihydroxyacetone phosphate (DHAP) [28]

  • The central glycolytic enzyme TPI plays a crucial role in coordinating energy with redox metabolism during stress response and in cancer

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Summary

Introduction

With the challenge of surviving in a constantly changing environment, cells have evolved mechanisms to flexibly regulate metabolism [1,2]. Glycolysis is mainly regulated through feedback and feed-forward cycles involving its intermediate metabolites. These cycles sustain intermediates while preventing their accumulation to toxic levels and are responsible for the oscillating behaviour of glycolytic reactions [3,4,5,6]. This enzymatic regulation is important for maintaining the balance of metabolism during changes in cell growth or environment [1,2]. The increased need for the redox cofactor NADPH during oxidative stress caused upon hydroperoxide exposure is met by diverting

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