Abstract
BackgroundCytokines are small proteins that regulate immunity in vertebrate species. Marsupial and eutherian mammals last shared a common ancestor more than 180 million years ago, so it is not surprising that attempts to isolate many key marsupial cytokines using traditional laboratory techniques have been unsuccessful. This paucity of molecular data has led some authors to suggest that the marsupial immune system is 'primitive' and not on par with the sophisticated immune system of eutherian (placental) mammals.ResultsThe sequencing of the first marsupial genome has allowed us to identify highly divergent immune genes. We used gene prediction methods that incorporate the identification of gene location using BLAST, SYNTENY + BLAST and HMMER to identify 23 key marsupial immune genes, including IFN-γ, IL-2, IL-4, IL-6, IL-12 and IL-13, in the genome of the grey short-tailed opossum (Monodelphis domestica). Many of these genes were not predicted in the publicly available automated annotations.ConclusionThe power of this approach was demonstrated by the identification of orthologous cytokines between marsupials and eutherians that share only 30% identity at the amino acid level. Furthermore, the presence of key immunological genes suggests that marsupials do indeed possess a sophisticated immune system, whose function may parallel that of eutherian mammals.
Highlights
IntroductionMarsupial and eutherian mammals last shared a common ancestor more than 180 million years ago, so it is not surprising that attempts to isolate many key marsupial cytokines using traditional laboratory techniques have been unsuccessful
Cytokines are small proteins that regulate immunity in vertebrate species
Unsuccessful attempts to isolate T cell derived cytokines in the laboratory has led some authors to suggest that the marsupial immune system is 'primitive' and does not possess the level of complexity demonstrated by eutherians such as humans and mice
Summary
Marsupial and eutherian mammals last shared a common ancestor more than 180 million years ago, so it is not surprising that attempts to isolate many key marsupial cytokines using traditional laboratory techniques have been unsuccessful. Only eleven cytokines including one receptor have been cloned from marsupials They include tumour necrosis factor alpha (TNF-α) [8,9], lymphotoxin (LT) -α and -β [10,11], Interleukin IL-1β [12], IL-1R2 [7], IL-5 [13], IL-10 [14], leukemia inhibitory factor LIF; a member of the IL-6 family [15] and three type I Interferon (IFN) genes [16]. Previous attempts to isolate the more divergent T-cell derived cytokines that orchestrate adaptive immunity such as IL-2, IL-4 and interferon-γ have failed [7,17]
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