Abstract

Cartilaginous fish are particularly vulnerable to anthropogenic stressors and environmental change because of their K-selected reproductive strategy. Accurate data from scientific surveys and landings are essential to assess conservation status and to develop robust protection and management plans. Currently available data are often incomplete or incorrect as a result of inaccurate species identifications, due to a high level of morphological stasis, especially among closely related taxa. Moreover, several diagnostic characters clearly visible in adult specimens are less evident in juveniles. Here we present results generated by the ELASMOMED Consortium, a regional network aiming to sample and DNA-barcode the Mediterranean Chondrichthyans with the ultimate goal to provide a comprehensive DNA barcode reference library. This library will support and improve the molecular taxonomy of this group and the effectiveness of management and conservation measures. We successfully barcoded 882 individuals belonging to 42 species (17 sharks, 24 batoids and one chimaera), including four endemic and several threatened ones. Morphological misidentifications were found across most orders, further confirming the need for a comprehensive DNA barcoding library as a valuable tool for the reliable identification of specimens in support of taxonomist who are reviewing current identification keys. Despite low intraspecific variation among their barcode sequences and reduced samples size, five species showed preliminary evidence of phylogeographic structure. Overall, the ELASMOMED initiative further emphasizes the key role accurate DNA barcoding libraries play in establishing reliable diagnostic species specific features in otherwise taxonomically problematic groups for biodiversity management and conservation actions.

Highlights

  • To assess and conserve biodiversity, it is critical to correctly identify species that occur in a given ecosystem in order to evaluate species richness and abundance

  • We present results generated by the ELASMOMED Consortium, a regional network aiming to sample and DNA-barcode the Mediterranean Chondrichthyans with the ultimate goal to provide a comprehensive DNA barcode reference library

  • Many studies have shown the effectiveness of the mitochondrial cytochrome c oxidase subunit I (COI) gene as a universal barcode sequence for species identification in animal lineages [1,2]

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Summary

Introduction

To assess and conserve biodiversity, it is critical to correctly identify species that occur in a given ecosystem in order to evaluate species richness and abundance. Methods of identification based on morphology were gradually integrated with methods based on DNA sequences, such as DNA barcoding thereby forming the so called molecular taxonomy. DNA barcoding seeks to advance both specimens identification and species discovery through the analysis of patterns of sequences divergence of a universal, standardized gene region. Many studies have shown the effectiveness of the mitochondrial cytochrome c oxidase subunit I (COI) gene as a universal barcode sequence for species identification in animal lineages [1,2]. Molecular taxonomy overcomes some problems posed by traditional morphological identification such as homoplasy [3] and phenotypic plasticity [4] of characters used for species identification. Traditional taxonomy doesn’t allow the identification of cryptic species [6]. In many cases it has been successfully employed to resolve species boundaries between morphologically conserved taxa (e.g. tribe Bombini, [10])

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