High-dimensional MRI data analysis using a large-scale manifold learning approach

Abstract

A novel manifold learning approach is presented to efficiently identify low-dimensional structures embedded in high-dimensional MRI data sets. These low-dimensional structures, known as manifolds, are used in this study for predicting brain tumor progression. The data sets consist of a series of high-dimensional MRI scans for four patients with tumor and progressed regions identified. We attempt to classify tumor, progressed and normal tissues in low-dimensional space. We also attempt to verify if a progression manifold exists--the bridge between tumor and normal manifolds. By identifying and mapping the bridge manifold back to MRI image space, this method has the potential to predict tumor progression. This could be greatly beneficial for patient management. Preliminary results have supported our hypothesis: normal and tumor manifolds are well separated in a low-dimensional space. Also, the progressed manifold is found to lie roughly between the normal and tumor manifolds.