Abstract
An alternative control for gastrointestinal nematode (GIN) infection in goats can be achieved by genetic improvement of the host resistance through identification of genes controlling the resistance mechanisms and their use in breeding programs under a marker-assisted selection or gene introgression frameworks. In this context, we aimed to develop genome wide association studies (GWAS) for resistance to H. contortus in Creole goats from Guadeloupe to identify possible candidate genes associated with GIN resistance in this population. Resistance was characterized by the fecal egg counting (FEC). A total of 182 Creole goats were phenotyped for FEC and genotyped through Illumina Goat SNP50 BeadChip. After SNP quality control analysis, 46,643 SNP markers were used for GWAS. The significant associations were identified by fitting a linear mixed model. A total of seven QTL (on the chromosomes 4, 6, 11, and 17) associated to FEC were reported and candidate genes recording was performed at these positions. The identified genes were related to the intestine damage (PROM1), inflammation process (FGFBP1), immune response (LIMCH1), hemorrhage control (ADAMTS3), and muscle weakness (SUCLG1). Network analysis provided annotation results linking all identified candidate genes, which are biologically related to resistance mechanisms approaching H. contortus infections.
Sign-in/Register to access full text options 
Talk to us
Join us for a 30 min session where you can share your feedback and ask us any queries you have
Schedule a callDisclaimer: All third-party content on this website/platform is and will remain the property of their respective owners and is provided on "as is" basis without any warranties, express or implied. Use of third-party content does not indicate any affiliation, sponsorship with or endorsement by them. Any references to third-party content is to identify the corresponding services and shall be considered fair use under The CopyrightLaw.
