Abstract
BackgroundPolycystic kidney disease with hyperinsulinaemic hypoglycaemia (HIPKD) is a recently described disease caused by a single nucleotide variant, c.‐167G>T, in the promoter region of PMM2 (encoding phosphomannomutase 2), either in homozygosity or compound heterozygosity with a pathogenic coding variant in trans. All patients identified so far are of European descent, suggesting a possible founder effect.MethodsWe generated high density genotyping data from 11 patients from seven unrelated families, and used this information to identify a common haplotype that included the promoter variant. We estimated the age of the promoter mutation with DMLE+ software, using demographic parameters corresponding to the European population.ResultsAll patients shared a 0.312 Mb haplotype which was absent in 503 European controls available in the 1000 Genomes Project. The age of this mutation was estimated as 105–110 generations, indicating its occurrence around 600 BC, a time of intense migration, which might explain the presence of the same mutations in Europeans around the globe.ConclusionThe shared unique haplotype among seemingly unrelated patients is consistent with a founder effect in Europeans.
Highlights
In 2017, we described a previously unrecognised autosomal recessive disorder, polycystic kidney disease with hyperinsulinaemic hypoglycaemia (HIPKD) (Cabezas et al, 2017)
We investigate the origin of the promoter variant and whether it relates to a common founder effect
The promoter variant implicated in the development of HIPKD is associated with a common haplotype in all the affected individuals
Summary
Wellcome Trust; Medical Research Council, Grant/Award Number: 98144; Royal Society, Grant/Award Number: 105636/Z/14/Z; Kids Kidney Research, Grant/Award Number: 105636/Z/14/Z; Juan Rodes, Grant/Award Number: 105636/Z/14/Z; Great Ormond Street Hospital Charity, Grant/Award Number: 105636/Z/14/Z; St Peter's Trust for Kidney Bladder & Prostate Research, Grant/Award Number: 105636/Z/14/Z; European Commission, Grant/Award Number: 2012-3 05608; David and Elaine Potter Foundation; Instituto de Salud Carlos III, Grant/Award Number: CP11/00263
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