Expanding the Zooplankton Inventory of the Levantine Basin: Novel Taxa and First Records from South Lebanon

Summary Long‐term, slow ecological processes such as changes in plant community structure and composition strongly regulate ecosystem responses to climate change. Shifts in plant community are expected in chronically altered environments under warming. However, experimental evidence for long‐term shifts and the associated mechanisms is still scarce in temperate grasslands. Here, we explore the long‐term responses of a prairie plant community to 14‐year (2000–2013) manipulations of climate warming and clipping in Oklahoma, USA. Infrared heaters were used to elevate soil temperature by about 2 °C all year round, and annual clipping was applied to mimic hay harvest. Community composition was resistant to experimental warming in the first seven years, but started to show responses starting from the eighth year; clipping consistently affected community composition over the years. Compositional change under long‐term warming was mainly due to one invasive species and three dominant species. The negative correlations in relative abundance between the invasive species and the dominant species suggest interspecific competition. Community structure (i.e. richness, evenness and diversity) had no overall response to experimental warming. However, in 2007, the extreme wet year, warming reduced species richness by 30%. Clipping promoted species richness by 10% on average over the 14 years but decreased community evenness. Warming did not interact with clipping in influencing the plant community variables. Synthesis. Our study provides experimental evidence for long‐term shifts in plant community composition due to warming and revealed novel mechanisms (i.e. species invasion and associated biotic interactions) underlying the long‐term shift. The results also suggest that climate extremes may elicit or advance community responses to climate warming. The findings highlight that long‐term climate change experiments are essential to reveal potential shifts in community composition.

ABSTRACTHigh-elevation ecosystems will experience increasing periods of above-average warmth and altered precipitation changes because of climate change. This causes uncertainties for community properties such as productivity and biodiversity. Increasing temperature may increase productivity by increasing growing season length and metabolic rate or decrease productivity by causing drought stress. Competitive outcomes between species may change with altered climatic conditions, causing shifts in community composition. This study investigates the resistance of aboveground biomass and plant community composition of montane and alpine grassland ecosystems to abruptly altered temperature and precipitation conditions. Intact plant-soil communities were translocated downslope spanning an elevational gradient of 2,090 m in the European Alps. We hypothesize that increasing temperature leads to (1) increased aboveground biomass in the absence of precipitation deficits, (2) decreased species richness, and (3) shifts in plant community composition. After one year of exposure to their new environment, aboveground biomass changes appeared to be dependent on precipitation regimes, whereas species richness declined consistently with changed climatic conditions. No deterministic shift in community composition was found. Abrupt changes in climatic conditions can lead to rapid responses of community properties, indicating that these high-elevation communities may have low initial resistance to future heat waves and droughts.

Both biogeographical and rainfall manipulation studies show that soil water content can be a strong driver of microbial community composition. However, we do not yet know if these patterns emerge because certain bacterial taxa are better able to survive at dry soil moisture regimes or if they are due to other drought-sensitive ecosystem properties indirectly affecting microbial community composition. In this study, we evaluated (1) whether bacterial community composition changed under an 11-year drought manipulation and (2) whether shifts under drought could be explained by variation in the moisture sensitivity of growth among bacterial taxa (moisture niche partitioning). Using 454 pyrosequencing of 16S rRNA, we observed shifts in bacterial community composition under drought, coincident with changes in other soil properties. We wet-up dry soils from drought plots to five moisture levels, and measured respiration and the composition of actively growing communities using bromodeoxyuridine (BrdU) labeling of DNA. The field drought experiment affected the composition of the active community when incubated at different moisture levels in the laboratory, as well as short-term (36-hour) respiration rates. Independent of history, bacterial communities also displayed strong niche partitioning across the wet-up moisture gradient. Although this indicates that moisture has the potential to drive bacterial community composition under long-term drought, species distributions predicted by response to moisture did not reflect the community composition of plots that were subjected to long-term drought. Bacterial community structure was likely more strongly driven by other environmental factors that changed under long-term drought, or not shaped by response to water level upon wet-up. The approach that we present here for linking niches to community composition could be adapted for other environmental variables to aid in predicting microbial species distributions and community responses to environmental change.

Accelerating rates of climate change and a paucity of whole-community studies of climate impacts limit our ability to forecast shifts in ecosystem structure and dynamics, particularly because climate change can lead to idiosyncratic responses via both demographic effects and altered species interactions. We used a multispecies model to predict which processes and species' responses are likely to drive shifts in the composition of a space-limited benthic marine community. Our model was parametrized from experimental manipulations of the community. Model simulations indicated shifts in species dominance patterns as temperatures increase, with projected shifts in composition primarily owing to the temperature dependence of growth, mortality and competition for three critical species. By contrast, warming impacts on two other species (rendering them weaker competitors for space) and recruitment rates of all species were of lesser importance in determining projected community changes. Our analysis reveals the importance of temperature-dependent competitive interactions for predicting effects of changing climate on such communities. Furthermore, by identifying processes and species that could disproportionately leverage shifts in community composition, our results contribute to a mechanistic understanding of climate change impacts, thereby allowing more insightful predictions of future biodiversity patterns.

Climate change effects on soil microarthropod abundance and community structure

Delineating ecological regions in marine systems: Integrating physical structure and community composition to inform spatial management in the eastern Bering Sea

Simple SummaryClimate warming affects diversity, community composition, and spatial distribution of several plant and invertebrate species. Bumblebees in alpine ecosystems are particularly exposed to climate change due to even stronger warming compared to the global mean. To investigate the effects of climate warming, we sampled bumblebees along mountain slopes, compared the records to historical data from 1935 and 1936 and related our findings to climate models. We found that bumblebee species communities differed significantly between the two sampling periods. Our analyses showed that rising temperatures in the spring were the most plausible factor explaining this shift in community composition. Moreover, the recent bumblebee data showed significantly lower species diversity compared to the historical records. For example, the number of cuckoo bee species (socio-parasitic bumblebees that use the nests of other species for reproduction) was significantly lower compared to the historical data. Even though we did not detect more warmth-loving species, recent communities showed an increase in species that can deal well with variable climatic conditions. We conclude that the composition and functionality of bumblebee communities in the study area have been significantly affected by climate warming, with land use and vegetation changes likely playing an additional important role.Climate warming has been observed as the main cause of changes in diversity, community composition, and spatial distribution of different plant and invertebrate species. Due to even stronger warming compared to the global mean, bumblebees in alpine ecosystems are particularly exposed to these changes. To investigate the effects of climate warming, we sampled bumblebees along an elevational gradient, compared the records with data from 1935 and 1936, and related our results to climate models. We found that bumblebee community composition differed significantly between sampling periods and that increasing temperatures in spring were the most plausible factor explaining these range shifts. In addition, species diversity estimates were significantly lower compared to historical records. The number of socio-parasitic species was significantly higher in the historical communities, while recent communities showed increases in climate generalists and forest species at lower elevations. Nevertheless, no significant changes in community-weighted means of a species temperature index (STI) or the number of cold-adapted species were detected, likely due to the historical data resolution. We conclude that the composition and functionality of bumblebee communities in the study area have been significantly affected by climate warming, with changes in land use and vegetation cover likely playing an additional important role.

The long-term effects of invasive signal crayfish (Pacifastacus leniusculus) on instream macroinvertebrate communities

We investigated the relationship between bacterioplankton production (BP), respiration (BR), and community composition measured by terminal restriction fragment length polymorphism in the southern North Sea over a seasonal cycle. Major changes in bacterioplankton richness were apparent from April to December. While cell-specific BP decreased highly significantly with increasing bacterioplankton richness, cell-specific BR was found to be variable along the richness gradient, suggesting that bacterioplankton respiration is rather independent from shifts in the bacterial community composition. As a consequence, the bacterial growth efficiency [BGE = BP/(BP + BR)] was negatively related to bacterioplankton richness, explaining approximately 43% of the variation in BGE. Our results indicate that despite the observed shifts in the community composition, the main function of the bacterioplankton, the remineralization of dissolved organic carbon to CO(2), is rather stable.

Ocean acidification (OA), a process of increasing seawater acidity caused by the uptake of anthropogenic carbon dioxide (CO2) by the ocean, is expected to change surface ocean pH to levels unprecedented for millions of years, affecting marine food web structures and trophic interactions. Using an in situ mesocosm approach we investigated effects of OA on community composition and trophic transfer of essential fatty acids (FA) in a natural plankton assemblage. Elevated pCO2 favored the smallest phytoplankton size class in terms of biomass, primarily picoeukaryotes, at the expense of chlorophyta and haptophyta in the nano-plankton size range. This shift in community composition and size structure was accompanied by a decline in the proportion of polyunsaturated FA (PUFA) to total FA content in the nano- and picophytoplankton size fractions. This decline was mirrored in a continuing reduction in the relative PUFA content of the dominant copepod, Calanus finmarchicus, which primarily fed on the nano-size class. Our results demonstrate that a shift in phytoplankton community composition and biochemical composition in response to rising CO2 can affect the transfer of essential compounds to higher trophic levels, which rely on their prey as a source for essential macromolecules.

Thanks to the concomitant recordings of vegetation and deer browsing sampled first in 1976, then resurveyed in 2006, we show that forest plant communities shifted in response to deer population dynamics, stand management and eutrophication. High deer populations alter forest understory dynamics worldwide. However, no study ever attempted to rank the importance of deer herbivory relatively to other environmental drivers. In the Arc-en-Barrois National Forest (France), we investigated whether (i) deer browsing is a critical driver of vegetation composition and dynamics, (ii) the vegetation communities recover after a decrease in deer populations. In 2006, we resurveyed 321 plots from a network of 1027 plots where vegetation composition and browsing pressure was first assessed in 1976. We used coinertia analysis to identify the gradients in vegetation composition in 1976, when abiotic variables were also recorded. We assessed shifts in plant community composition using mean Ellenberg indicator values, analysed plot scores shifts along the axes of the coinertia analysis and correlated these shifts with changes in browsing pressure. Two major gradients determined vegetation composition in 1976: edaphic variables (nitrogen availability and soil moisture) and browsing pressure. Over the next 30 years, we noticed a strong increase in nitrophilous plant species frequency and community composition shifted towards lightly browsed characteristics, accompanying a decrease in browsing pressure. Shifts in community composition were significantly correlated with the intensity of changes in browsing pressure, showing that deer population dynamics were a determinant driver of changes in plant assemblages. Our results provide evidence for a structuring effect of deer browsing on vegetation composition, once forest site variations (soil moisture and nitrogen) were accounted for. We observed an incomplete recovery of the communities 25 years after the reduction of deer densities, suggesting a delayed response to deer population reduction. Long-term monitoring of forest biodiversity should therefore include browsing pressure assessment to control for potential effects of wild ungulates.

Seasonal changes in light and physicochemical conditions have strong impacts on cyanobacteria, but how they affect community structure, metabolism, and biogeochemistry of cyanobacterial mats remains unclear. Light may be particularly influential for cyanobacterial mats exposed to sulphide by altering the balance of oxygenic photosynthesis and sulphide-driven anoxygenic photosynthesis. We studied temporal shifts in irradiance, water chemistry, and community structure and function of microbial mats in the Middle Island Sinkhole (MIS), where anoxic and sulphate-rich groundwater provides habitat for cyanobacteria that conduct both oxygenic and anoxygenic photosynthesis. Seasonal changes in light and groundwater chemistry were accompanied by shifts in bacterial community composition, with a succession of dominant cyanobacteria from Phormidium to Planktothrix, and an increase in diatoms, sulphur-oxidizing bacteria, and sulphate-reducing bacteria from summer to autumn. Differential abundance of cyanobacterial light-harvesting proteins likely reflects a physiological response of cyanobacteria to light level. Beggiatoa sulphur oxidation proteins were more abundant in autumn. Correlated abundances of taxa through time suggest interactions between sulphur oxidizers and sulphate reducers, sulphate reducers and heterotrophs, and cyanobacteria and heterotrophs. These results support the conclusion that seasonal change, including light availability, has a strong influence on community composition and biogeochemical cycling of sulphur and O2 in cyanobacterial mats.

The vast expanses of rangeland on the Tibetan Plateau, which support the livelihood of c. 9.8 million local inhabitants, have experienced rapid climate warming over the past 50 years. At the same time, precipitation has increased in large parts of the Plateau but decreased in other parts, particularly in the northwest. These trends are predicted to continue into the future. However, their potential effects on rangeland quality remain unclear. We conducted a two‐factor field experiment in which we manipulated temperature (control or warming by 1.5–1.8°C) and precipitation (control or 50% reduction or increase in rainfall) in an alpine grassland on the northeastern Tibetan Plateau, starting in 2011. From 2014 to 2016, we measured forage production and community composition, and in 2015 forage quality (crude protein, cell‐soluble contents, hemicellulose, cellulose, lignin and digestibility) was represented by seven abundant species. Overall, warming did not change total forage production at plant community level, but increased legume production and decreased non‐legume forb production. Increased and reduced precipitation enhanced and decreased forage production by 18.2% and 12.9% respectively. Increased precipitation in particular increased grass and sedge production, but not legume production. Forage quality showed species‐specific responses to the simulated climate changes. At community level, warming and reduced precipitation improved forage quality, which were mainly caused by a shift in community composition towards more legumes, rather than the direct effects of simulated climate changes. Meanwhile, increased precipitation did not reduce forage quality, despite the precipitation‐induced increase in forage production. Integrating forage production and quality into nutrient production as a measure of rangeland quality, we found that warming and increased precipitation additively improved rangeland quality, while reduced precipitation decreased it. Synthesis and applications. Rangeland quality, an important ecosystem provisioning service, will benefit from a warmer climate on the Tibetan Plateau in the regions with a predicted increase in precipitation, but not in those regions where precipitation might be reduced in the future. We suggest management strategies, including reseeding native legumes, establishing sustainable pastures and assisting the exchange of harvested forage, to cope with the challenges posed by these different climate change scenarios.

The metacommunity concept has recently been described to account for the roles of dispersal in regulating community structure. Despite its strong theoretical basis, there exist few large-scale and long-term examples of its applicability in aquatic ecosystems. In this study we used a long-term dataset (1961-2007) on the relative abundances of the dominant limnetic fishes from two interconnected lakes to investigate the synergistic effects of naturally declining lake volume (approximately 50% in 50 years), climate variation, fishery management, and dispersal on community composition. We found a marked shift in fish community composition and variability during a period of rapid natural habitat change; however, the change was most apparent in the downstream, more stable lake of the system rather than at the site of disturbance. Multivariate analysis suggested significant shifts in community composition and variability in the downstream lake. Results indicated that the community composition in both lakes was best explained by habitat loss in the upper watershed and the number of spawning adult sockeye salmon the previous year (reflecting both natural processes and commercial fishing). Furthermore, communities exhibited site-specific responses to climatic conditions (e.g., index of the Pacific Decadal Oscillation), whereby the upper lake responded to climate within a given year and with a 1-year time lag, whereas the downstream community responded only with a 1-year lag. We attribute this difference largely to downstream dispersal and recruitment of fish from the upper lake. Thus, we suggest that the interconnected nature of the communities in this system provides a useful and large-scale example of the metacommunity concept, whereby the effects of environmental disturbance on community structure ultimately depend on the effects of these disturbances on dispersal among ecosystems.

The Wadi El-Rayan lakes are important aquatic environments located at the border of the great North African Sahara. Quantifying the temporal changes in these lakes due to natural and/or anthropogenic stressors is critical when assessing potential impacts on aquatic ecosystem health and the sustainability of fisheries. To detect the changes in fish communities and their drivers, the landing composition of the Wadi El-Rayan lakes over the past 30 years was quantitatively analyzed. The areas of the lakes dramatically decreased from 110 km2 in 1991 to 73 km2 in 2019. The loss of the lake area was attributed to climate warming, where the evaporation rate exceeded the volume of recharge and the recharge decreased due to an increase in agriculture and aquaculture. The total landing significantly increased in the past three decades due to an increase in the fishing effort (number of licensed boats). Nile tilapia, mullet, and grass carp dominated the landings. The pelagic-to-demersal ratio indicated a shift in the fish community composition towards demersal species. This shift was attributed to an increase in the eutrophication level. The fish communities of the landing data were clustered into four distinct groups. These clusters were significantly differentiated (p < 0.001) in both a PERMANOVA test and a PCA plot. There was a gradual replacement of the dominant species among these clusters. The most recent cluster (2018–2019) was characterized by rare species dominating the community. This shift in species composition suggests that target taxa may have been overexploited. The total landing also decreased, which may have been a result of climate warming. Furthermore, the presence of alien and warm-water species significantly increased. The fish community structure and composition shift could be attributed to anthropogenic (mismanagement) and natural climatic changes (warming).