Abstract

The C1 domain zinc finger structure is highly conserved among the protein kinase C (PKC) superfamily members. As the interaction site for the second messenger sn-1,2-diacylglycerol (DAG) and for the phorbol esters, the C1 domain has been an important target for developing selective ligands for different PKC isoforms. However, the C1 domains of the atypical PKC members are DAG/phorbol ester-insensitive. Compared with the DAG/phorbol ester-sensitive C1 domains, the rim of the binding cleft of the atypical PKC C1 domains possesses four additional positively charged arginine residues (at positions 7, 10, 11, and 20). In this study, we showed that mutation to arginines of the four corresponding sites in the C1b domain of PKCdelta abolished its high potency for phorbol 12,13-dibutyrate in vitro, with only marginal remaining activity for phorbol 12-myristate 13-acetate in vivo. We also demonstrated both in vitro and in vivo that the loss of potency to ligands was cumulative with the introduction of the arginine residues along the rim of the binding cavity rather than the consequence of loss of a single, specific residue. Computer modeling reveals that these arginine residues reduce access of ligands to the binding cleft and change the electrostatic profile of the C1 domain surface, whereas the basic structure of the binding cleft is still maintained. Finally, mutation of the four arginine residues of the atypical PKC C1 domains to the corresponding residues in the deltaC1b domain conferred response to phorbol ester. We speculate that the arginine residues of the C1 domain of atypical PKCs may provide an opportunity for the design of ligands selective for the atypical PKCs.

Highlights

  • The C1 domain zinc finger structure is highly conserved among the protein kinase C (PKC) superfamily members

  • We speculate that the arginine residues of the C1 domain of atypical PKCs may provide an opportunity for the design of ligands selective for the atypical PKCs

  • Compared with the DAG/phorbol ester-responsive PKC C1 domains, one of the most striking characteristics of the atypical PKCs (PKC␨ as well as PKC␫) is that there are several positively charged arginine residues located in the loops that make up the binding site

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Summary

EXPERIMENTAL PROCEDURES

Materials—[20-3H]Phorbol 12,13-dibutyrate ([3H]PDBu) (20 Ci/mmol) was purchased from PerkinElmer. Expression and Purification of GST Fusion Proteins from Escherichia coli—The recombinant plasmids containing the arginine mutants of the GST-␦C1b domains were expressed and purified from BL-21 E. coli as described elsewhere [24]. Molecular Modeling—Structures for the single mutants N7R, S10R, P11R, and L20R were generated from the crystal structure of the PKC␦ C1b domain [28] by mutating the selected residue to arginine while preserving the backbone and ␹1 angles. Structures for the double, triple, and quadruple mutants were built using the lowest energy conformer found for each single arginine side chain. Residues homologous to ␦C1b were left unchanged from their crystallographic positions, and the binding site arginine residues at positions 7, 10, 11, and 20 were given the same lowest energy conformation found in the conformational search above. PARSE3 atomic charges and radii were used [32], modified slightly to include values for zinc (ϩ2 charge, 0.74 Å radius) and to modify the values for the eight zinc-coordinating residues, which were each given a partial charge of Ϫ0.5 to set the net charge for each zinc-binding motif to zero

RESULTS
Combinations of the Mutations to
Modeling and Analysis of the Arginine Mutants in Silico
Visualization of the Electrostatic
Characterization of the Arginine Mutants in Vivo
DISCUSSION
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