Abstract

Suberoylanilide hydroxamic acid (SAHA), a pan HDAC inhibitor, has been approved by the Food and Drug Administration (FDA) to treat cutaneous T cell lymphoma (CTCL). Nevertheless, the mechanisms underlying the therapeutic effects of SAHA on tumors are yet not fully understood. Protein phosphorylation is one of the most important means to regulate key biological processes (BPs), such as cell division, growth, migration, differentiation, and intercellular communication. Thus, investigation on the impacts of SAHA treatment on global cellular phosphorylation covering major signaling pathways deepens our understanding on its anti-tumor mechanisms. Here we comprehensively identified and quantified protein phosphorylation for the first time in nasopharyngeal carcinoma (NPC) cells upon SAHA treatment by combining tandem mass tags (TMTs)-based quantitative proteomics and titanium dioxide (TiO2)-based phosphopeptide enrichment. In total, 7,430 phosphorylation sites on 2,456 phosphoproteins were identified in the NPC cell line 5-8F, of which 1,176 phosphorylation sites on 528 phosphoproteins were significantly elevated upon SAHA treatment. Gene ontology (GO) analysis showed that SAHA influenced several BPs, including mRNA/DNA processing and cell cycle. Furthermore, signaling pathway analysis and immunoblotting demonstrated that SAHA activated tumor suppressors like p53 and Rb1 via phosphorylation and promoted cell apoptosis in NPC cells but inactivated energetic pathways such as AMPK signaling. Overall, our study indicated that SAHA exerted anti-tumor roles in NPC cells, which may serve as novel therapeutic for NPC patients.

Highlights

  • Nasopharyngeal carcinoma, as a common type of head and neck cancer, has a much higher incidence in Southern China and Southeast Asia, where the annual incidence is about 30 cases per 100,000 persons, in contrast to fewer than one case per 100,000 persons in the United States and Europe (Chang and Adami, 2006; Cao et al, 2011)

  • Combining quantitative phosphoproteomics and bioinformatic analysis, we demonstrated that suberoylanilide hydroxamic acid (SAHA) treatment altered phosphorylation in key signaling pathways in nasopharyngeal carcinoma (NPC) cells

  • We indicated that SAHA inhibits proliferation and induces apoptosis in NPC cells

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Summary

Introduction

Nasopharyngeal carcinoma, as a common type of head and neck cancer, has a much higher incidence in Southern China and Southeast Asia, where the annual incidence is about 30 cases per 100,000 persons, in contrast to fewer than one case per 100,000 persons in the United States and Europe (Chang and Adami, 2006; Cao et al, 2011). Histone deacetylases play key roles in regulating chromatin remodeling, the gene expressions of which they regulate epigenetically by turning down histone lysine acetylation in various pathophysiological conditions (Shahbazian and Grunstein, 2007). Both HDACs and histone lysine acetylation are involved in tumorigenesis, and inhibition of HDACs by specific inhibitors has emerged as an effective anti-tumor strategy (Wagner et al, 2010).

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