Characterization of organic matrix macromolecules from the shells of the antarctic scallop, Adamussium colbecki

Abstract

The highly acidic soluble organic matrix (SM) isolated from shells of the Antarctic scallop, Adamussium colbecki, was shown to consist of 1.5% carbohydrate by weight and 12.8% phosphate by weight. Total SM is composed of approximately 31% Asx, 29% Ser, and 18% Gly. Separation of the SM using RP-HPLC yielded a minimum of six protein fractions labeled RP-1 through RP-6 in order of elution of the column. The first fraction, RP-1, was found to be an effective inhibitor of calcium carbonate crystal nucleation in vitro suggesting a role for this protein in the regulation of shell mineralization. A less acidic fraction, RP-3, showed less inhibitory activity and dephosphorylation of RP-1 resulted in almost complete loss of inhibitory activity. Automated Edman degradation was used to sequence peptides generated by chemical cleavage of RP-1. Mild acid hydrolysis yielded peptides with sequences of N-S-G-D-D-D-D-G-G-OH, N-S-G-G-(S,G)-G-OH, and N-S-G-R-G-OH. Cleavage with hydroxylamine yielded peptides of N-D-D-D-D-D-D-D-D-OH, N-L-Y-Y-OH, and N-A-V-G-E-S-D-OH. These data suggest biochemical similarities between this SM and other SM proteins isolated from both calcium carbonate and calcium phosphate biominerals, and presents evidence of a primary domain structure similar to that described for oyster SM and phosphophoryn isolated from rat dentin.