Airborne bacterial communities present in particulate matter (PM2.5 and PM10) samples collected during different seasons in Temuco City in Chile

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Airborne bacterial communities present in particulate matter (PM2.5 and PM10) samples collected during different seasons in Temuco City in Chile

ReferencesShowing 10 of 45 papers
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Size distribution of bioaerosols from biomass burning emissions: Characteristics of bacterial and fungal communities in submicron (PM1.0) and fine (PM2.5) particles
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Prevalence, antimicrobial susceptibility and virulence gene profiles of Arcobacter species isolated from human stool samples, foods of animal origin, ready-to-eat salad mixes and environmental water
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Taxon-specific aerosolization of bacteria and viruses in an experimental ocean-atmosphere mesocosm
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  • 10.1007/s00203-021-02740-6
Airborne bacterial community associated with fine particulate matter (PM2.5) under different air quality indices in Temuco city, southern Chile.
  • Jan 21, 2022
  • Archives of Microbiology
  • Jacquelinne J Acuña + 8 more

Temuco (Chile) is one of the most polluted cities in Chile and Latin America. Although the fine fraction of particulate matter (PM2.5) has been extensively studied and monitored due to its negative impact on public health, its microbiological components remain unknown. We explored, the airborne bacterial community in PM2.5 under good, moderate, alert, pre-emergency and emergency indices of air quality (AQIs) established by the Chilean government. Bacterial community relationship with environmental factors (PM2.5, PM10, carbon monoxide, among others), was also evaluated. Significant differences in PM2.5 bacterial community composition associated with AQIs were revealed, using 16S rRNA target sequences of denaturing gradient gel electrophoresis (DGGE) bands. Bacterial communities in PM2.5 were mainly clustered (80%) into emergency and pre-emergency samples. The dominant phylum was Proteobacteria and most abundant genus was Novosphingobium, traditionally related to opportunistic respiratory diseases. The main factors associated with community structure were PM2.5, PM10 and carbon monoxide concentrations. This study exposed that bacterial community composition in Temuco varies according to AQIs, with the occurrence of potential opportunistic bacteria on heavily polluted days.Supplementary InformationThe online version contains supplementary material available at 10.1007/s00203-021-02740-6.

  • Research Article
  • Cite Count Icon 47
  • 10.1016/j.atmosenv.2015.08.089
Day and night variation in chemical composition and toxicological responses of size segregated urban air PM samples in a high air pollution situation
  • Sep 11, 2015
  • Atmospheric Environment
  • P.I Jalava + 18 more

Day and night variation in chemical composition and toxicological responses of size segregated urban air PM samples in a high air pollution situation

  • Research Article
  • Cite Count Icon 74
  • 10.1128/aem.00004-18
Structural Variation in the Bacterial Community Associated with Airborne Particulate Matter in Beijing, China, during Hazy and Nonhazy Days
  • Apr 16, 2018
  • Applied and Environmental Microbiology
  • Dong Yan + 8 more

The structural variation of the bacterial community associated with particulate matter (PM) was assessed in an urban area of Beijing during hazy and nonhazy days. Sampling for different PM fractions (PM2.5 [<2.5 μm], PM10 [<10 μm], and total suspended particulate) was conducted using three portable air samplers from September 2014 to February 2015. The airborne bacterial community in these samples was analyzed using the Illumina MiSeq platform with bacterium-specific primers targeting the 16S rRNA gene. A total of 1,707,072 reads belonging to 6,009 operational taxonomic units were observed. The airborne bacterial community composition was significantly affected by PM fractions (R = 0.157, P < 0.01). In addition, the relative abundances of several genera significantly differed between samples with various haze levels; for example, Methylobacillus, Tumebacillus, and Desulfurispora spp. increased in heavy-haze days. Canonical correspondence analysis and permutation tests showed that temperature, SO2 concentration, relative humidity, PM10 concentration, and CO concentration were significant factors that associated with airborne bacterial community composition. Only six genera increased across PM10 samples (Dokdonella, Caenimonas, Geminicoccus, and Sphingopyxis) and PM2.5 samples (Cellulomonas and Rhizobacter), while a large number of taxa significantly increased in total suspended particulate samples, such as Paracoccus, Kocuria, and Sphingomonas Network analysis indicated that Paracoccus, Rubellimicrobium, Kocuria, and Arthrobacter were the key genera in the airborne PM samples. Overall, the findings presented here suggest that diverse airborne bacterial communities are associated with PM and provide further understanding of bacterial community structure in the atmosphere during hazy and nonhazy days.IMPORTANCE The results presented here represent an analysis of the airborne bacterial community associated with particulate matter (PM) and advance our understanding of the structural variation of these communities. We observed a shift in bacterial community composition with PM fractions but no significant difference with haze levels. This may be because the bacterial differences are obscured by high bacterial diversity in the atmosphere. However, we also observed that a few genera (such as Methylobacillus, Tumebacillus, and Desulfurispora) increased significantly on heavy-haze days. In addition, Paracoccus, Rubellimicrobium, Kocuria, and Arthrobacter were the key genera in the airborne PM samples. Accurate and real-time techniques, such as metagenomics and metatranscriptomics, should be developed for a future survey of the relationship of airborne bacteria and haze.

  • Research Article
  • Cite Count Icon 10
  • 10.1016/j.talanta.2009.01.039
Quantitative extraction of organic tracer compounds from ambient particulate matter collected on polymer substrates
  • Jan 24, 2009
  • Talanta
  • Qinyue Sun + 3 more

Quantitative extraction of organic tracer compounds from ambient particulate matter collected on polymer substrates

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  • Cite Count Icon 59
  • 10.1080/08958370801935117
Source Apportionment of Particulate Matter in the U.S. and Associations with Lung Inflammatory Markers
  • Jan 1, 2008
  • Inhalation Toxicology
  • Rachelle M Duvall + 7 more

Size-fractionated particulate matter (PM) samples were collected from six U.S. cities and chemically analyzed as part of the Multiple Air Pollutant Study. Particles were administered to cultured lung cells and the production of three different proinflammatory markers was measured to explore the association between the health effect markers and PM. Ultrafine, fine, and coarse PM samples were collected between December 2003 and May 2004 over a 4-wk period in each city. Filters were pooled for each city and the PM samples were extracted then analyzed for trace metals, ions, and elemental carbon. Particle extracts were applied to cultured human primary airway epithelial cells, and the secreted levels of interleukin-8 (IL-8), heme oxygenase-1, and cyclooxygenase-2 were measured 1 and 24 h following exposure. Fine PM sources were quantified by the chemical mass balance (CMB) model. The relationship between toxicological measures, PM sources, and individual species were evaluated using linear regression. Ultrafine and fine PM mass were associated with increases in IL-8 (r2 = .80 for ultrafine and r2 = .52 for fine). Sources of fine PM and their relative contributions varied across the sampling sites and a strong linear association was observed between IL-8 and secondary sulfate from coal combustion (r2 = .79). Ultrafine vanadium, lead, copper, and sulfate were also associated with increases in IL-8. Increases in inflammatory markers were not observed for coarse PM mass and source markers. These findings suggest that certain PM size fractions and sources are associated with markers of lung injury or inflammation.

  • Research Article
  • Cite Count Icon 5
  • 10.1016/s1872-2040(17)61080-6
Determination of Methylamines and Methylamine- N -oxides in Particulate Matter Using Solid Phase Extraction Coupled with Ion Chromatography
  • Apr 1, 2018
  • Chinese Journal of Analytical Chemistry
  • Qing-Yang Liu + 1 more

Determination of Methylamines and Methylamine- N -oxides in Particulate Matter Using Solid Phase Extraction Coupled with Ion Chromatography

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  • Research Article
  • Cite Count Icon 5
  • 10.3390/atmos14040631
Simultaneous Quantification of Real-World Elemental Contributions from the Exhaust and Non-Exhaust Vehicular Emissions Using Road Dust Enrichment Factor-Elemental Carbon Tracer Method (EFECT)
  • Mar 27, 2023
  • Atmosphere
  • Duran Karakaş + 7 more

Emission control regulations have been essential in reducing vehicular exhaust emissions. However, the contribution of exhaust and non-exhaust emissions to ambient particulate matter (PM) has not yet been accurately quantified due to the lack of standardized sampling and measurement methods to set regulations. The identified sources and the source profiles generated have not been comparable as none of the emission data collection techniques and the receptor models applied in the literature have produced a standard or reference method to simultaneously identify and quantify the non-exhaust emission sources. This study utilized and thoroughly characterized PM samples including 32 major and trace elements from a mixed fleet in a mountain highway tunnel atmosphere in Bolu, Türkiye. This work proposed a two-stage, simple, and robust method based on road dust enrichment factor (EF) and elemental carbon (EC) tracer methods (EFECT) for the identification and prediction of the exhaust (exh), and non-exhaust (n-exh) emissions in PM. The indicated method revealed that road dust resuspension emissions are the most significant contributor to the concentrations of crustal elements. This method was used successfully to determine the real-world elemental contributions of road dust resuspension (rdrs), emissions (em), exhaust (exh), and non-exhaust (n-exh) emission sources to the elemental concentrations in PM samples. This study provided significant insights into generating actual source profiles, source-specific emission factors, and the source apportionment results for vehicular emission sources worldwide. Considering this, PM data of any particle size fraction (PM10, PM10-2.5, and PM2.5, for example) can be used as input for the EFECT, provided that the data include the analytical results of elemental carbon in both the atmospheric PM and road dust samples having similar PM sizes.

  • Research Article
  • Cite Count Icon 1
  • 10.1097/01.ee9.0000608612.92643.3d
Untargeted Metabolomics Analysis of Wood Smoke and Diesel Exhaust Particulate Matter
  • Oct 1, 2019
  • Environmental Epidemiology
  • Liu Y + 5 more

TPS 711: The exposome, Exhibition Hall, Ground floor, August 26, 2019, 3:00 PM - 4:30 PM Background: Untargeted metabolomics analysis is a valuable tool in the field of metabolic profiling of biological samples, but it has been less widely applied to characterization of environmental mixtures. The current study explores using untargeted analysis of environmental samples of air pollution for component analysis and source appointment. Methods: Particulate matter (PM) in wood smoke and diesel exhaust were collected in laboratory settings at the University of Washington. Total suspended particles were collected using 37 mm Teflon filtration membranes (PALL Corporation, USA) in open-face cassettes attached to air sampling pumps (AirChek XR5000, SKC Inc., USA). After sample extraction (Methanol), concentration and reconstitution (25μL Methanol and 25μL 0.4% (v/v) acetic acid), PM samples were analyzed by accurate-mass Q-TOF (Agilent 6500) for separation and qualification. We used MetaboAnalyst (version 4.0) to perform principal component analysis (PCA) to visualize the data and t-tests to compare chemical features between wood smoke and diesel exhaust groups. Results: We collected and analyzed six wood smoke PM samples (weight = 65 ± 3 μg) and five diesel exhaust PM samples (average weight = 150 ± 1 μg). Using Q-TOF HPLC/MS, we detected 1513 chemical features from the PM samples. In a volcano plot, a total of 112 chemical features were identified that exhibited differences (fold-change > 2, and p-value < 0.05) between PM from the wood smoke and diesel exhaust. PCA showed that 81.3% of the variance was explained when including the 5 most significant principal components (PC). Both the 2-D scores plot and 3-D score plot between selected PCs totally separated wood smoke and diesel exhaust PM samples. Conclusion: Untargeted metabolomics analysis detected numerous chemical features from wood smoke and diesel exhaust PM samples. The untargeted analysis has the potential to be used in air pollution studies for components analysis and source appointment of PM.

  • Research Article
  • Cite Count Icon 12
  • 10.1007/s00216-009-3297-4
Determination of 43 polycyclic aromatic hydrocarbons in air particulate matter by use of direct elution and isotope dilution gas chromatography/mass spectrometry
  • Nov 21, 2009
  • Analytical and Bioanalytical Chemistry
  • Zheng Li + 5 more

We are reporting a method for measuring 43 polycyclic aromatic hydrocarbons (PAH) and their methylated derivatives (Me-PAHs) in air particulate matter (PM) samples using isotope dilution gas chromatography/high-resolution mass spectrometry (GC/HRMS). In this method, PM samples were spiked with internal standards, loaded into solid phase extraction cartridges, and eluted by dichloromethane. The extracts were concentrated, spiked with a recovery standard, and analyzed by GC/HRMS at 10,000 resolution. Sixteen (13)C-labeled PAHs and two deuterated Me-PAHs were used as internal standards to account for instrument variability and losses during sample preparation. Recovery of labeled internal standards was in the range of 86-115%. The proposed method is less time-consuming than commonly used extraction methods, such as sonication and accelerated solvent extraction (ASE), and it eliminates the need for a filtration step required after the sonication extraction method. Limits of detection ranged from 41 to 332 pg/sample for the 43 analytes. This method was used to analyze reference materials from the National Institute of Standards and Technology. The results were consistent with those from ASE and sonication extraction, and these results were also in good agreement with the certified or reference concentrations. The proposed method was then used to measure PAHs on PM(2.5) samples collected at three sites (urban, suburban, and rural) in Atlanta, GA. The results showed distinct seasonal and spatial variation and were consistent with an earlier study measuring PM(2.5) samples using an ASE method, further demonstrating the compatibility of this method and the commonly used ASE method.

  • Research Article
  • Cite Count Icon 12
  • 10.1016/j.scitotenv.2022.157382
Winter and spring variation in sources, chemical components and toxicological responses of urban air particulate matter samples in Guangzhou, China
  • Jul 14, 2022
  • Science of The Total Environment
  • Mo Yang + 16 more

Winter and spring variation in sources, chemical components and toxicological responses of urban air particulate matter samples in Guangzhou, China

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  • Cite Count Icon 2
  • 10.1007/s11869-019-00667-y
Cytotoxicity and genotoxicity of size-fractionated particulate matter collected in underground workplaces
  • Jan 25, 2019
  • Air Quality, Atmosphere &amp; Health
  • Elena Guerrera + 7 more

Road tunnel construction involves the use of explosives and diesel-powered machines in a very limited indoor space. Tunnel construction workers are thus exposed to a variety of toxic substances, including dust, asbestos, silica, concrete, diesel fumes, and oil mist. In this study, the low noise miniaturized Sioutas Cascade Impactor (SKC) has been used to collect PM samples as a function of particle size (i.e., aerodynamic diameter). Airborne particulates were sampled into a road tunnel (final length 2391 m) under construction near the village of Pale, Municipality of Foligno, Umbrian Apennines (State Highway 77 “Val di Chienti”). Three sampling sessions were performed: (i) in the West yard, during dislodging of rocks; (ii) in the East yard during drilling of rocks, and (iii) during scaling and grouting with quick-drying shotcrete. The aim of this study was to characterize size-fractionated PM samples for their cytotoxic/genotoxic potentials. Toxicological evaluation was carried out in vitro on A549 lung carcinoma cells: cytotoxicity was assessed by Trypan blue dye exclusion assay, whereas genotoxicity was assessed by comet assay (primary DNA damage) and cytokinesis-block micronucleus (CBMN) Cytome assay (cytogenetic effects). Primary DNA damage (i.e., strand breakage) was mainly caused by coarse fractions A (O > 2.5 μm) sampled in the West yard (sample i) and in the East yard (sample iii). Cytogenetic effects were mainly caused by the fine fractions AF (aerodynamic O < 0.25 μm) sampled in the East yard (sample ii). Results reported in this article show that particulate matter (PM) samples collected underground (i.e., during road tunnel construction) may trigger various cytotoxic/genotoxic effects. The recent classification of air pollution and PM itself as carcinogenic to humans (group 1) by the IARC makes indoor/outdoor air pollution a growing matter of concern. Our results highlight the need in this occupational setting for a reduction, if applicable, of PM emission (prevention), or an implementation of work practices by stressing the importance of proper use of protective equipment (protection).

  • Research Article
  • Cite Count Icon 69
  • 10.1016/j.chemosphere.2015.04.077
Assessing Polycyclic Aromatic Hydrocarbons (PAHs) using passive air sampling in the atmosphere of one of the most wood-smoke-polluted cities in Chile: The case study of Temuco
  • May 25, 2015
  • Chemosphere
  • Karla Pozo + 9 more

Assessing Polycyclic Aromatic Hydrocarbons (PAHs) using passive air sampling in the atmosphere of one of the most wood-smoke-polluted cities in Chile: The case study of Temuco

  • Research Article
  • Cite Count Icon 11
  • 10.1080/10962247.2019.1630025
Quantification of elemental and total carbon in combustion particulate matter using thermal-oxidative analysis
  • Jul 23, 2019
  • Journal of the Air & Waste Management Association
  • Christopher D Klingshirn + 5 more

The use of a two-step thermal-oxidative analysis (TOA) technique for quantification of the mass of total carbon (TC) and elemental carbon (EC) of turbine engine-borne particulate matter (PM) has been evaluated. This approach could be used in lieu of analysis methods which were developed to characterize diluted PM. This effort is of particular interest as turbine engine PM emissions typically have a higher EC content than ambient aerosols, and filter sample mass loadings can be significantly greater than recommended for existing analysis techniques. Analyses were performed under a pure oxygen environment using a two-step temperature profile; reference carbon and actual PM samples were used to identify appropriate analysis conditions. Thermal gravimetric analysis (TGA) methods were used to provide guidance on the nature of the carbon in several of the materials. This was necessary as a standard reference material does not exist for determination of the EC fraction in PM. The TGA also assisted in identifying an appropriate temperature range for the first-stage of the TOA method. Quantification of TC and EC for turbine engine PM samples using TOA was compared to results obtained using the NIOSH 5040 thermal-optical method. For first-stage TOA temperatures of 350°C and 400°C, excellent agreement between the techniques was observed in both the quantified TC and EC, supporting the viability for using TOA for analysis of turbine engine PM samples. A primary benefit of using TOA for these types of PM samples is that filters with relatively high PM mass loadings (sampled at the emission source) can be readily analyzed. In addition, an entire filter sample can be evaluated, as compared to the use of a filter punch sample for the NIOSH technique. While the feasibility of using a TOA method for engine PM samples has been demonstrated, future studies to estimate potential OC charring and oxidation of EC-type material may provide additional data to assess its impact on the OC/EC fractions for other carbon-type measurements. Implications: This work presents results and procedures of an analytical method for the determination of total and elemental carbon, i.e., TC and EC present in combustion source particulate matter samples. In general, it is shown that the LECO TOA methodology is as reliable and comprehensive as NIOSH 5040 for determining TC and EC carbon types in particulate matter present in turbine emission sources, and should be considered as an alternative. Principles of the methodology, differences, and corresponding agreement with the standard NIOSH 5040 method and TGA analysis are discussed.

  • Research Article
  • Cite Count Icon 23
  • 10.1016/j.talanta.2019.120350
Chemical characterization of size-segregated particulate matter (PM) by inductively coupled plasma – Tandem mass spectrometry (ICP-MS/MS)
  • Sep 12, 2019
  • Talanta
  • Akif Arı + 2 more

Chemical characterization of size-segregated particulate matter (PM) by inductively coupled plasma – Tandem mass spectrometry (ICP-MS/MS)

  • Research Article
  • Cite Count Icon 128
  • 10.1021/es011060n
Emission of polycyclic aromatic hydrocarbons, toxicity, and mutagenicity from domestic cooking using sawdust briquettes, wood, and kerosene.
  • Jan 18, 2002
  • Environmental Science &amp; Technology
  • Nguyen Thi Kim Oanh + 2 more

Smoke samples, in both gas and particulate matter (PM) phases, of the three domestic stoves were collected using U.S. EPA modified method 5 and were analyzed for 17 PAH (HPLC-UV), acute toxicity (Microtox test), and mutagenicity (Amestest). The gas phase of smoke contributed > or = 95% of 17 PAH, > or = 96% of toxicity, and > or = 60% of mutagenicity. The highest emission factor of 17 PAH was from sawdust briquettes (260 mg/kg), but the highest emission of 11 genotoxic PAH was from kerosene (28 mg/kg). PM samples of kerosene smoke were not toxic. The total toxicity emission factor was the highest from sawdust, followed by kerosene and wood fuel. Smoke samples from the kerosene stove were not mutagenic. TA98 indicated the presence of both direct and indirect mutagenic activities in PM samples of sawdust and wood fuel but only direct mutagenic activities in the gas phase. TA100 detected only direct mutagenic activities in both PM and gas-phase samples. The higher mutagenicity emission factor was from wood fuel, 12 x 10(6) revertants/kg (TA100-S9) and 3.5 x 10(6) (TA98-S9), and lower from sawdust, 2.9 x 10(6) (TA100-S9) and 2.8 x 10(6) (TA98-S9). The low burning rate and high efficiency of a kerosene stove have resulted in the lowest PAH, toxicity, and mutagenicity emissions from daily cooking activities. The bioassays produced toxicity and mutagenicity results in correspondence with the PAH content of samples. The tests could be used for a quick assessment of potential health risks.

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